BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030E08LP1|AL429236
(1069 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1544 0.0
>3x_Contig1302
Length = 5215
Score = 1544 bits (771), Expect = 0.0
Identities = 838/864 (96%), Gaps = 4/864 (0%)
Strand = Plus / Minus
Query: 183 cccttcaacttaaaaggttacaagcgtacactagagttaactactagaaatagtcaacgg 242
||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 5215 cccttcaacttaaaaggttacaagcgtacac-agagttaac-ac-agaaatagtcaacgg 5159
Query: 243 tgttcacgatacagtcccaatacatatctgtwcctgatcgcggctgcgggacattaaagt 302
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5158 -gttcacgatacagtcccaatacatatctgtacctgatcgcggctgcgggacattaaagt 5100
Query: 303 actttctgtcattctaatttaaacgawgaaatcaattgatatcttgagccaatwcatgty 362
|||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 5099 actttctgtcattctaatttaaacgaagaaatcaattgatatcttgagctaattcatgtt 5040
Query: 363 tttgtgatactatatmagtataaagggtatcatcttcctggattcaatcttgaaccgtag 422
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5039 tttgtgatactatataagtataaagggtatcatcttcctggattcaatcttgaaccgtag 4980
Query: 423 attaataacttataagagactaaatccytttwtttwtwttttttatgtthnnnwttcgct 482
||||||||||||||||||||||||||| | || | |||||||| ||||||
Sbjct: 4979 attaataacttataagagactaaatcccgctagttagatgttttatgtgccgtattcgct 4920
Query: 483 tgcattctttaatatgagccattctgttccacgttaagcacagaaaaataaaaaattcca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4919 tgcattctttaatatgagccattctgttccacgttaagcacagaaaaataaaaaattcca 4860
Query: 543 aagtttaactgaaagatgaatcagttgatcttaagcaagtwaaaacgtcggacggctcaa 602
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4859 aagtttaactgaaagatgaatcagttgatcttaagcaagtaaaaacgtcggacggctcaa 4800
Query: 603 ccaatcaaccgagcaaatacctcaaggacaaataaactatgaaaattgatagtacaccat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 ccaatcaaccgagcaaatacctcaaggacaaataaactatgaaaattgatagtacaccat 4740
Query: 663 tgaaagaaggtcaattaccattcgataaagaagtggttagaaaagccgctttggacttga 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4739 tgaaagaaggtcaattaccattcgataaagaagtggttagaaaagccgctttggacttga 4680
Query: 723 ccgaatctgtagaatcctggaagaaggggaagctatacaagtatacgctagatccagaaa 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4679 ccgaatctgtagaatcctggaagaaggggaagctatacaagtatacgctagatccagaaa 4620
Query: 783 attgtaccaatgatcccaagtgtgaagtgcaaacctacgggcagaccattggtggtgatt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4619 attgtaccaatgatcccaagtgtgaagtgcaaacctacgggcagaccattggtggtgatt 4560
Query: 843 attggttatgtagaagatcatttcacaacattaatcccgaaaattaccgcaaagtagtcg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4559 attggttatgtagaagatcatttcacaacattaatcccgaaaattaccgcaaagtagtcg 4500
Query: 903 aagtattgaacggtagtcaatgggatgcgagtctcgagaaatgggttatgcccgatattg 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4499 aagtattgaacggtagtcaatgggatgcgagtctcgagaaatgggttatgcccgatattg 4440
Query: 963 cagcaagatccaaactggaacaagagtacatagagactctttcaaaatgtcacgtggtga 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4439 cagcaagatccaaactggaacaagagtacatagagactctttcaaaatgtcacgtggtga 4380
Query: 1023 gacaggtcactgacgattgtgaca 1046
||||||||||||||||||||||||
Sbjct: 4379 gacaggtcactgacgattgtgaca 4356
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7164
Number of Sequences: 1807
Number of extensions: 7164
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 1069
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1053
effective length of database: 10,329,639
effective search space: 10877109867
effective search space used: 10877109867
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)